STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFS00414.1Periplasmic aspartyl protease. (615 aa)    
Predicted Functional Partners:
AFR99663.1
Hypothetical protein.
  
     0.768
AFS00413.1
Metal-dependent membrane protease.
       0.762
AFS00842.1
Hypothetical protein; Streptogramin lyase.
  
     0.756
AFR99950.1
Uncharacterized protein conserved in bacteria.
  
     0.745
AFS00415.1
Hypothetical protein.
       0.718
AFS00411.1
Uncharacterized protein conserved in bacteria.
       0.699
dmpA
D-aminopeptidase.
       0.699
AFR99694.1
Hypothetical protein; Lysophospholipase L1 and related esterases.
  
     0.669
AFS00972.1
Hypothetical protein.
  
     0.633
repB1
RepB protein.
  
     0.561
Your Current Organism:
Lactobacillus buchneri CD034
NCBI taxonomy Id: 1071400
Other names: L. buchneri CD034, Lactobacillus buchneri str. CD034, Lactobacillus buchneri strain CD034
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.