STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFS00599.1Hypothetical protein. (54 aa)    
Predicted Functional Partners:
AFS00596.1
Hypothetical protein.
       0.773
AFS00597.1
Putative phage tail protein.
       0.773
AFS00598.1
Phage-related tail protein.
       0.773
AFS00600.1
Hypothetical protein.
       0.634
AFS00594.1
Hypothetical protein.
       0.620
AFS00595.1
Phage minor structural protein.
       0.620
AFS00601.1
Phage major tail protein.
       0.497
AFS00602.1
Hypothetical protein.
       0.497
AFS00603.1
Putative head-tail joining protein.
       0.497
Your Current Organism:
Lactobacillus buchneri CD034
NCBI taxonomy Id: 1071400
Other names: L. buchneri CD034, Lactobacillus buchneri str. CD034, Lactobacillus buchneri strain CD034
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.