STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFS01006.1Beta-glucosidase-related glycosidase. (794 aa)    
Predicted Functional Partners:
malz1
Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
 
  
 0.934
malz3
Alpha-glucosidase.
   
 
 0.912
AFS01274.1
alpha-L-rhamnosidase.
   
 0.908
AFS01007.1
Putative nitrate transporter.
 
   
 0.765
pts1BCA
Putative sucrose-specific phosphotransferase system, enzyme IIBCA.
  
  
 0.668
AFR99441.1
Antimicrobial peptide ABC transporter permease.
  
  
 0.595
AFS00027.1
Beta-lactamase family protein.
  
  
 0.470
AFS01005.1
Hypothetical protein.
       0.451
uida1
Beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
 
   
 0.418
flgJ2
Flagellar rod assembly protein/muramidase.
     
 0.402
Your Current Organism:
Lactobacillus buchneri CD034
NCBI taxonomy Id: 1071400
Other names: L. buchneri CD034, Lactobacillus buchneri str. CD034, Lactobacillus buchneri strain CD034
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.