STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFS01119.1NhaP family Na+/H+ and K+/H+ antiporter. (663 aa)    
Predicted Functional Partners:
AFS00480.1
2,6-dichloro-p-hydroquinone 1,2-dioxygenase.
 
     0.551
AFS01120.1
Hypothetical protein.
       0.508
AFS01121.1
Putative NADPH-quinone reductase.
       0.508
eriC
Voltage-gated chloride channel family protein.
  
  
 0.426
AFS01074.1
Hypothetical protein; Rhodanese-related sulfurtransferase.
  
     0.422
AFS01073.1
HTH-type transcriptional regulator.
  
     0.419
Your Current Organism:
Lactobacillus buchneri CD034
NCBI taxonomy Id: 1071400
Other names: L. buchneri CD034, Lactobacillus buchneri str. CD034, Lactobacillus buchneri strain CD034
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.