STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BG57_06375Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (269 aa)    
Predicted Functional Partners:
BG57_06370
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
BG57_06380
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.766
BG57_29460
Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family.
  
     0.761
BG57_16650
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.752
BG57_20400
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.687
BG57_05625
Signal peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.678
BG57_18930
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.676
BG57_18835
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.647
BG57_03660
Pilus assembly protein PilZ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.629
BG57_04745
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.623
Your Current Organism:
Caballeronia grimmiae
NCBI taxonomy Id: 1071679
Other names: Burkholderia grimmiae, Burkholderia sp. R27, Burkholderia sp. enrichment culture clone R27, C. grimmiae, CGMCC 1.11013, Caballeronia grimmiae (Tian et al. 2013) Dobritsa and Samadpour 2016, DSM 25160, LMG 27580, LMG:27580, Paraburkholderia grimmiae, Paraburkholderia grimmiae (Tian et al. 2013) Sawana et al. 2015, strain R27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.