STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKK12133.1Hypothetical protein. (63 aa)    
Predicted Functional Partners:
AKK12134.1
Putative integral membrane protein.
       0.773
ponA1
Membrane carboxypeptidase (penicillin-binding protein).
       0.741
AKK12136.1
Hypothetical protein.
       0.535
rpsF
Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
       0.432
Your Current Organism:
Corynebacterium uterequi
NCBI taxonomy Id: 1072256
Other names: C. uterequi, CCUG 61235, Corynebacterium sp. CCUG 44698, Corynebacterium sp. CCUG 61186, Corynebacterium sp. CCUG 61235, Corynebacterium uterequi Hoyles et al. 2013, DSM 45634, strain VM 2298
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.