STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1L9S5A8WD_REPEATS_REGION domain-containing protein. (1496 aa)    
Predicted Functional Partners:
A0A1L9SPV4
RanBD1 domain-containing protein.
    
 0.857
A0A1L9SEM7
WD_REPEATS_REGION domain-containing protein.
   
0.845
A0A1L9SES6
SPRY domain-containing protein.
    
 0.844
A0A1L9SK07
Histone-lysine N-methyltransferase, H3 lysine-4 specific; Catalytic component of the COMPASS (Set1C) complex that specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently plays a role in telomere length maintenance and transcription elongation regulation.
   
 0.812
A0A1L9SIX4
TPR_REGION domain-containing protein.
    
 0.801
A0A1L9SJ68
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
  0.779
A0A1L9S9E9
Histone domain-containing protein.
    
 0.766
A0A1L9SSC3
Histone H3; Belongs to the histone H3 family.
    
 0.766
A0A1L9S9Y8
Histone H2A; Belongs to the histone H2A family.
   
 0.688
A0A1L9SC86
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
  
 
0.688
Your Current Organism:
Penicilliopsis zonata
NCBI taxonomy Id: 1073090
Other names: Aspergillus zonatus CBS 506.65, P. zonata CBS 506.65, Penicilliopsis zonata CBS 506.65
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.