STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1L9S7V9Chromo domain-containing protein. (1177 aa)    
Predicted Functional Partners:
A0A1L9S9E9
Histone domain-containing protein.
   
 0.917
A0A1L9SSC3
Histone H3; Belongs to the histone H3 family.
   
 0.917
A0A1L9SMK0
SET domain-containing protein.
    
 0.883
A0A1L9SJQ6
Uncharacterized protein.
   
 0.872
A0A1L9SRN8
Uncharacterized protein.
   
 0.872
A0A1L9SQ70
Uncharacterized protein.
    
 0.859
A0A1L9SC97
Uncharacterized protein.
    
 0.848
A0A1L9SSE8
Uncharacterized protein.
    
 0.848
A0A1L9SS64
Uncharacterized protein.
    
 0.825
A0A1L9S9Y1
Uncharacterized protein.
    
 0.793
Your Current Organism:
Penicilliopsis zonata
NCBI taxonomy Id: 1073090
Other names: Aspergillus zonatus CBS 506.65, P. zonata CBS 506.65, Penicilliopsis zonata CBS 506.65
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.