STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1L9SC86WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (295 aa)    
Predicted Functional Partners:
A0A1L9SHZ7
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
0.999
A0A1L9SIW7
WD_REPEATS_REGION domain-containing protein.
    
 0.999
A0A1L9SM35
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.999
A0A1L9SPK5
Peptidase S59 domain-containing protein.
    
 0.999
A0A1L9SPV4
RanBD1 domain-containing protein.
    
 0.999
A0A1L9SQI9
Uncharacterized protein.
    
 0.999
A0A1L9SRL9
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.999
A0A1L9SL70
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.998
A0A1L9SPR2
Uncharacterized protein.
   
 0.998
A0A1L9S7G8
Uncharacterized protein.
    
 0.996
Your Current Organism:
Penicilliopsis zonata
NCBI taxonomy Id: 1073090
Other names: Aspergillus zonatus CBS 506.65, P. zonata CBS 506.65, Penicilliopsis zonata CBS 506.65
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.