STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1L9SCM9Uncharacterized protein. (89 aa)    
Predicted Functional Partners:
A0A1L9SEM7
WD_REPEATS_REGION domain-containing protein.
    
 0.997
A0A1L9SES6
SPRY domain-containing protein.
    
 0.997
A0A1L9SK07
Histone-lysine N-methyltransferase, H3 lysine-4 specific; Catalytic component of the COMPASS (Set1C) complex that specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently plays a role in telomere length maintenance and transcription elongation regulation.
    
 0.982
A0A1L9SDZ3
WD_REPEATS_REGION domain-containing protein.
    
 0.965
A0A1L9SWZ2
PHD-type domain-containing protein.
    
 0.948
A0A1L9SIU6
Uncharacterized protein.
    
 0.930
A0A1L9SRU0
Uncharacterized protein.
    
 
 0.923
A0A1L9SKT8
Ubiquitin-like domain-containing protein.
   
   0.875
A0A1L9SKW9
RRN7-type domain-containing protein.
   
   0.875
A0A1L9SV44
WD_REPEATS_REGION domain-containing protein.
   
 0.872
Your Current Organism:
Penicilliopsis zonata
NCBI taxonomy Id: 1073090
Other names: Aspergillus zonatus CBS 506.65, P. zonata CBS 506.65, Penicilliopsis zonata CBS 506.65
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