STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1L9SDS3XPA_C domain-containing protein. (331 aa)    
Predicted Functional Partners:
A0A1L9S7G2
ERCC4 domain-containing protein.
    
 0.982
A0A1L9SCD9
Uncharacterized protein.
    
 0.982
A0A1L9SS31
Helicase ATP-binding domain-containing protein.
    
 0.980
A0A1L9SLS4
Uncharacterized protein.
    
 0.978
A0A1L9SNV0
Uncharacterized protein.
    
 0.968
A0A1L9SQ87
Uncharacterized protein.
    
 0.960
A0A1L9SAW6
ERCC4 domain-containing protein.
    
 0.956
A0A1L9S4I3
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
 0.947
A0A1L9SI63
Uncharacterized protein.
    
 0.940
A0A1L9SCX9
RPA_C domain-containing protein.
    
 0.939
Your Current Organism:
Penicilliopsis zonata
NCBI taxonomy Id: 1073090
Other names: Aspergillus zonatus CBS 506.65, P. zonata CBS 506.65, Penicilliopsis zonata CBS 506.65
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.