STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1L9SE92Uncharacterized protein. (739 aa)    
Predicted Functional Partners:
A0A1L9SJ40
RPOLD domain-containing protein.
    
 0.808
A0A1L9SGC3
Serine/threonine-protein kinase.
    
 0.803
A0A1L9SA90
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.777
A0A1L9SL43
Uncharacterized protein.
    
 0.771
A0A1L9SUA8
Uncharacterized protein; Belongs to the actin family.
    
 0.771
A0A1L9SLG7
Uncharacterized protein.
    
  0.748
A0A1L9SN42
RPOL4c domain-containing protein.
    
 0.747
A0A1L9SQM8
Uncharacterized protein.
    
  0.744
A0A1L9SSE5
Uncharacterized protein.
    
  0.744
A0A1L9SUX2
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
  0.744
Your Current Organism:
Penicilliopsis zonata
NCBI taxonomy Id: 1073090
Other names: Aspergillus zonatus CBS 506.65, P. zonata CBS 506.65, Penicilliopsis zonata CBS 506.65
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