STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1L9SFF2Uncharacterized protein. (548 aa)    
Predicted Functional Partners:
A0A1L9SED3
WD_REPEATS_REGION domain-containing protein.
   
   0.823
A0A1L9SQ84
UPF0020 domain-containing protein.
   
  
 0.822
A0A1L9SRI4
CP-type G domain-containing protein.
   
    0.788
A0A1L9SRG2
Sas10 domain-containing protein.
   
    0.753
A0A1L9SEJ0
Uncharacterized protein.
   
    0.747
A0A1L9SNX5
Brix domain-containing protein.
   
    0.746
A0A1L9SG61
CBF domain-containing protein.
   
    0.745
A0A1L9SS60
Brix domain-containing protein.
   
    0.745
A0A1L9S6Z8
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
    0.744
A0A1L9SK20
WD_REPEATS_REGION domain-containing protein.
   
    0.743
Your Current Organism:
Penicilliopsis zonata
NCBI taxonomy Id: 1073090
Other names: Aspergillus zonatus CBS 506.65, P. zonata CBS 506.65, Penicilliopsis zonata CBS 506.65
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