A0A1L9SIK0 protein (Penicilliopsis zonata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A1L9SIK0

SEC7 domain-containing protein. (2034 aa)

Predicted Functional Partners:

A0A1L9SHP1

0.939

A0A1L9SUN3

0.936

A0A1L9SRF9

0.850

A0A1L9SRP4

0.850

A0A1L9S880

0.708

A0A1L9SWX7

0.693

A0A1L9S9F1

0.631

A0A1L9SNW9

0.616

A0A1L9STS9

0.616

A0A1L9SCI8

0.615

Your Current Organism:

Penicilliopsis zonata

NCBI taxonomy Id: 1073090
Other names: Aspergillus zonatus CBS 506.65, P. zonata CBS 506.65, Penicilliopsis zonata CBS 506.65

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1L9S880	A0A1L9SHP1	SEC7 domain-containing protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.784
A0A1L9S880	A0A1L9SIK0	SEC7 domain-containing protein.	SEC7 domain-containing protein.	0.708
A0A1L9S880	A0A1L9SNW9	SEC7 domain-containing protein.	Uncharacterized protein.	0.522
A0A1L9S880	A0A1L9SRF9	SEC7 domain-containing protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.771
A0A1L9S880	A0A1L9SRP4	SEC7 domain-containing protein.	Uncharacterized protein.	0.771
A0A1L9S880	A0A1L9STS9	SEC7 domain-containing protein.	1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.	0.522
A0A1L9S880	A0A1L9SUN3	SEC7 domain-containing protein.	SEC7 domain-containing protein.	0.788
A0A1L9S880	A0A1L9SWX7	SEC7 domain-containing protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.730
A0A1L9S9F1	A0A1L9SIK0	Importin N-terminal domain-containing protein.	SEC7 domain-containing protein.	0.631
A0A1L9SCI8	A0A1L9SHP1	Uncharacterized protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.800
A0A1L9SCI8	A0A1L9SIK0	Uncharacterized protein.	SEC7 domain-containing protein.	0.615
A0A1L9SCI8	A0A1L9SRF9	Uncharacterized protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.819
A0A1L9SCI8	A0A1L9SRP4	Uncharacterized protein.	Uncharacterized protein.	0.819
A0A1L9SCI8	A0A1L9SUN3	Uncharacterized protein.	SEC7 domain-containing protein.	0.993
A0A1L9SCI8	A0A1L9SWX7	Uncharacterized protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.647
A0A1L9SHP1	A0A1L9S880	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	SEC7 domain-containing protein.	0.784
A0A1L9SHP1	A0A1L9SCI8	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.800
A0A1L9SHP1	A0A1L9SIK0	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	SEC7 domain-containing protein.	0.939
A0A1L9SHP1	A0A1L9SRP4	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.633
A0A1L9SHP1	A0A1L9SUN3	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	SEC7 domain-containing protein.	0.829