STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1L9SIS4Uncharacterized protein. (585 aa)    
Predicted Functional Partners:
LSM4
U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
 
      0.900
A0A1L9SP62
Spindle pole body component.
    
 0.835
A0A1L9SVE8
Spindle pole body component.
    
 0.797
A0A1L9SIZ8
Phosphatase tensin-type domain-containing protein.
 
      0.795
A0A1L9SS75
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
   
 0.795
A0A1L9SRY9
Uncharacterized protein.
    
 0.777
A0A1L9SRZ6
Spindle pole body component.
    
 0.777
A0A1L9SWM1
Spindle pole body component.
    
 0.777
A0A1L9SMU4
Uncharacterized protein.
   
 0.772
A0A1L9SNZ9
Uncharacterized protein.
   
 0.772
Your Current Organism:
Penicilliopsis zonata
NCBI taxonomy Id: 1073090
Other names: Aspergillus zonatus CBS 506.65, P. zonata CBS 506.65, Penicilliopsis zonata CBS 506.65
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