STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1L9SKF0KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family. (266 aa)    
Predicted Functional Partners:
A0A1L9S7G3
S1-like domain-containing protein; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.
  
 0.999
A0A1L9S870
Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family.
  
 
 0.999
A0A1L9S8G2
40S ribosomal protein S27.
   
 0.999
A0A1L9S8I5
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
  
 0.999
A0A1L9S8L3
S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family.
  
 0.999
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.999
A0A1L9S975
Ribosomal_S10 domain-containing protein.
  
 0.999
A0A1L9S981
Ribosomal_L28e domain-containing protein.
   
 
 0.999
A0A1L9S9C0
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.999
A0A1L9S9M0
Uncharacterized protein.
  
 
 0.999
Your Current Organism:
Penicilliopsis zonata
NCBI taxonomy Id: 1073090
Other names: Aspergillus zonatus CBS 506.65, P. zonata CBS 506.65, Penicilliopsis zonata CBS 506.65
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