STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1L9SLA6Uncharacterized protein. (1667 aa)    
Predicted Functional Partners:
A0A1L9SCZ0
CPSF_A domain-containing protein.
    
 0.977
A0A1L9SV73
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.869
A0A1L9SGB4
PCI domain-containing protein.
    
 0.764
A0A1L9SPB9
MPN domain-containing protein.
    
 0.757
A0A1L9SNH0
RING-type domain-containing protein.
    
  0.724
A0A1L9SL94
Uncharacterized protein.
     
 0.718
A0A1L9S4A4
Uncharacterized protein.
    
  0.716
A0A1L9SPN4
DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes.
     
 0.712
A0A1L9S8I2
PCI domain-containing protein.
    
  0.703
A0A1L9SFX0
PCI domain-containing protein.
    
  0.703
Your Current Organism:
Penicilliopsis zonata
NCBI taxonomy Id: 1073090
Other names: Aspergillus zonatus CBS 506.65, P. zonata CBS 506.65, Penicilliopsis zonata CBS 506.65
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