STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1L9SLQ5Uncharacterized protein. (766 aa)    
Predicted Functional Partners:
A0A1L9SCJ8
Uncharacterized protein.
   
 
 0.836
A0A1L9SIT6
Uncharacterized protein.
   
  0.572
A0A1L9SBP0
Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.
    
 
 0.534
A0A1L9STX5
Nuclear cap-binding protein subunit 2.
    
 
 0.511
A0A1L9SBP2
BRCT domain-containing protein.
    
 
 0.488
A0A1L9SRT7
Helicase ATP-binding domain-containing protein.
    
 0.488
A0A1L9SNY4
Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily.
   
 
 0.453
A0A1L9SAP1
Uncharacterized protein.
   
    0.447
A0A1L9SL76
Sister chromatid cohesion protein.
   
    0.447
A0A1L9S708
3'-5' exonuclease domain-containing protein.
   
 
 0.428
Your Current Organism:
Penicilliopsis zonata
NCBI taxonomy Id: 1073090
Other names: Aspergillus zonatus CBS 506.65, P. zonata CBS 506.65, Penicilliopsis zonata CBS 506.65
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