STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1L9SMC6RNA-dependent RNA polymerase. (1346 aa)    
Predicted Functional Partners:
A0A1L9SV25
Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.
    
 
 0.720
A0A1L9SU35
Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.
    
 
 0.647
A0A1L9SCW5
RNA helicase.
      
 0.573
A0A1L9SRT7
Helicase ATP-binding domain-containing protein.
     
 0.562
A0A1L9S8X6
RNA helicase.
      
 0.548
A0A1L9SAX6
RNA helicase.
      
 0.548
A0A1L9SJ40
RPOLD domain-containing protein.
    
   0.529
A0A1L9STK2
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
   0.529
A0A1L9SUX2
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
   0.529
A0A1L9SG59
Uncharacterized protein.
    
 
 0.514
Your Current Organism:
Penicilliopsis zonata
NCBI taxonomy Id: 1073090
Other names: Aspergillus zonatus CBS 506.65, P. zonata CBS 506.65, Penicilliopsis zonata CBS 506.65
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.