STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1L9SQE9Ubiquitin carboxyl-terminal hydrolase. (772 aa)    
Predicted Functional Partners:
A0A1L9SEC5
WD_REPEATS_REGION domain-containing protein.
    
 0.999
A0A1L9SUN7
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
 0.999
A0A1L9SKT8
Ubiquitin-like domain-containing protein.
    
 0.915
A0A1L9SKW9
RRN7-type domain-containing protein.
    
 0.915
A0A1L9SL60
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
  0.862
A0A1L9SCA9
BZIP domain-containing protein.
    
 0.857
A0A1L9SIX8
CIA30 domain-containing protein.
    
 0.857
A0A1L9SWQ3
Ubiquitin-like domain-containing protein.
    
 0.857
A0A1L9SA69
Ubiquitin-like domain-containing protein.
    
 0.855
A0A1L9SRX4
AN1-type domain-containing protein.
    
 0.855
Your Current Organism:
Penicilliopsis zonata
NCBI taxonomy Id: 1073090
Other names: Aspergillus zonatus CBS 506.65, P. zonata CBS 506.65, Penicilliopsis zonata CBS 506.65
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