STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1L9SRJ9Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. (217 aa)    
Predicted Functional Partners:
A0A1L9SHD1
Uncharacterized protein.
  
 0.997
A0A1L9SNL2
Ribosomal_L23eN domain-containing protein.
  
 0.997
A0A1L9SRE6
Uncharacterized protein.
  
 0.997
A0A1L9SRZ5
Ribosomal_L18_c domain-containing protein.
  
 0.997
A0A1L9SEI3
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
  
 0.996
A0A1L9SK23
KOW domain-containing protein.
  
 0.996
A0A1L9SKF8
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
   
 0.996
A0A1L9SPL1
Uncharacterized protein.
  
 0.996
A0A1L9SPW7
Uncharacterized protein.
  
 0.996
A0A1L9SR09
Uncharacterized protein.
  
 0.996
Your Current Organism:
Penicilliopsis zonata
NCBI taxonomy Id: 1073090
Other names: Aspergillus zonatus CBS 506.65, P. zonata CBS 506.65, Penicilliopsis zonata CBS 506.65
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