STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1L9SS88Uncharacterized protein. (246 aa)    
Predicted Functional Partners:
A0A1L9SPV4
RanBD1 domain-containing protein.
    
 0.799
A0A1L9SQI9
Uncharacterized protein.
   
 0.598
A0A1L9SRL9
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.594
A0A1L9SC86
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.575
A0A1L9SM35
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.534
A0A1L9S8H4
Ribosomal protein L37; Binds to the 23S rRNA.
    
  0.533
A0A1L9S8J8
Uncharacterized protein.
    
  0.533
A0A1L9S8K5
Uncharacterized protein.
    
  0.533
A0A1L9SQT1
Aminotran_5 domain-containing protein.
   
 
  0.527
A0A1L9SHZ7
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.525
Your Current Organism:
Penicilliopsis zonata
NCBI taxonomy Id: 1073090
Other names: Aspergillus zonatus CBS 506.65, P. zonata CBS 506.65, Penicilliopsis zonata CBS 506.65
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