STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1L9SSC9Uncharacterized protein. (811 aa)    
Predicted Functional Partners:
A0A1L9S794
Uncharacterized protein.
    
 0.928
A0A1L9SJM8
RRM domain-containing protein.
    
 0.840
A0A1L9S6A9
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.808
A0A1L9SVB6
Small nuclear ribonucleoprotein Sm D2.
    
 0.804
A0A1L9SIV2
Uncharacterized protein.
    
  0.796
A0A1L9SA75
Uncharacterized protein.
    
 0.793
A0A1L9SA80
Small nuclear ribonucleoprotein Sm D3.
    
 0.793
A0A1L9SLE8
Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.
    
 0.788
A0A1L9SG17
Small nuclear ribonucleoprotein G.
    
  0.783
A0A1L9S8E1
Uncharacterized protein.
    
 0.763
Your Current Organism:
Penicilliopsis zonata
NCBI taxonomy Id: 1073090
Other names: Aspergillus zonatus CBS 506.65, P. zonata CBS 506.65, Penicilliopsis zonata CBS 506.65
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