STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1L9STK1RRM domain-containing protein. (222 aa)    
Predicted Functional Partners:
A0A1L9STX5
Nuclear cap-binding protein subunit 2.
    
 0.928
A0A1L9SKX4
Uncharacterized protein.
   
 0.899
A0A1L9S994
Uncharacterized protein.
    
 0.893
A0A1L9SCZ6
Fip1 domain-containing protein.
   
 0.890
A0A1L9SG17
Small nuclear ribonucleoprotein G.
   
 0.883
A0A1L9S6A9
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.879
A0A1L9SAL3
Uncharacterized protein.
    
 0.878
A0A1L9SII9
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.878
A0A1L9SLE8
Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.
   
 0.878
A0A1L9SSZ0
GH16 domain-containing protein.
   
 0.878
Your Current Organism:
Penicilliopsis zonata
NCBI taxonomy Id: 1073090
Other names: Aspergillus zonatus CBS 506.65, P. zonata CBS 506.65, Penicilliopsis zonata CBS 506.65
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.