STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1L9SVM0Uncharacterized protein. (477 aa)    
Predicted Functional Partners:
A0A1L9SVG1
Uncharacterized protein.
   
 0.991
A0A1L9SQQ1
Uncharacterized protein.
    
0.989
A0A1L9SJZ1
Uncharacterized protein.
    
0.974
A0A1L9SVD0
Uncharacterized protein.
    
 0.904
A0A1L9SDX6
Uncharacterized protein.
    
 0.892
A0A1L9SS57
Uncharacterized protein.
    
 0.873
A0A1L9SEB0
Uncharacterized protein.
    
 0.861
A0A1L9SPM5
Uncharacterized protein.
    
 0.856
A0A1L9SQ45
Uncharacterized protein.
    
 0.848
A0A1L9SW25
Uncharacterized protein; Belongs to the AAA ATPase family.
   
 0.843
Your Current Organism:
Penicilliopsis zonata
NCBI taxonomy Id: 1073090
Other names: Aspergillus zonatus CBS 506.65, P. zonata CBS 506.65, Penicilliopsis zonata CBS 506.65
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.