STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1L9SVX9tRNA-synt_1c domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (596 aa)    
Predicted Functional Partners:
A0A1L9SHH6
Uncharacterized protein.
  
 0.983
A0A1L9SS89
Ribosomal_L7Ae domain-containing protein.
   
 0.983
A0A1L9SLC4
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.982
A0A1L9SNL2
Ribosomal_L23eN domain-containing protein.
   
 0.982
A0A1L9SBV8
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 0.981
A0A1L9S8J7
Uncharacterized protein.
   
 0.980
A0A1L9SPW7
Uncharacterized protein.
   
 0.980
A0A1L9S7G4
Uncharacterized protein.
  
 0.978
A0A1L9SRZ5
Ribosomal_L18_c domain-containing protein.
   
 0.975
A0A1L9SNH1
Uncharacterized protein.
   
 0.974
Your Current Organism:
Penicilliopsis zonata
NCBI taxonomy Id: 1073090
Other names: Aspergillus zonatus CBS 506.65, P. zonata CBS 506.65, Penicilliopsis zonata CBS 506.65
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.