STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF91954.1Magnesium chelatase subunit I. (487 aa)    
Predicted Functional Partners:
SHF91930.1
Hypothetical protein.
 
    0.916
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
   
 
 0.891
SHF46594.1
Capsule assembly protein Wzi.
  
 0.881
SHF91837.1
Capsule assembly protein Wzi.
  
 0.881
SHG16564.1
Capsule assembly protein Wzi.
  
 0.881
SHG64567.1
Ca-activated chloride channel family protein.
  
 0.881
SHG64599.1
Ca-activated chloride channel family protein.
  
 0.881
SHG72820.1
N-terminal double-transmembrane domain-containing protein.
  
 0.881
SHF68756.1
Putative membrane protein.
     
 0.874
SHG03492.1
Phytoene dehydrogenase-related protein.
  
 
 0.478
Your Current Organism:
Salegentibacter echinorum
NCBI taxonomy Id: 1073325
Other names: CICC 10466, DSM 24579, NRRL B-59666, S. echinorum, Salegentibacter echinorum Xia et al. 2014, Salegentibacter sp. HD4, strain HD4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.