STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF87432.1solute:Na+ symporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (558 aa)    
Predicted Functional Partners:
SHF87389.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
    0.617
SHF87360.1
Hypothetical protein.
       0.451
SHF76417.1
Galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
 
     0.423
Your Current Organism:
Salegentibacter echinorum
NCBI taxonomy Id: 1073325
Other names: CICC 10466, DSM 24579, NRRL B-59666, S. echinorum, Salegentibacter echinorum Xia et al. 2014, Salegentibacter sp. HD4, strain HD4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.