STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG37539.1Hypothetical protein. (389 aa)    
Predicted Functional Partners:
SHG62367.1
Electron transfer flavoprotein alpha subunit apoprotein.
 0.981
SHF53729.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.980
SHG62332.1
Electron transfer flavoprotein beta subunit.
 
 
 0.969
SHF68703.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.934
SHF95095.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.899
SHF53685.1
acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.898
SHF86985.1
Acetyl-CoA carboxylase, carboxyltransferase component.
 
 
 0.843
SHF89446.1
3-hydroxybutyryl-CoA dehydrogenase.
 0.833
SHF98932.1
glutaryl-CoA dehydrogenase.
  
  
 
0.802
SHG17248.1
glutaryl-CoA dehydrogenase/hypothetical protein.
  
  
 
0.794
Your Current Organism:
Salegentibacter echinorum
NCBI taxonomy Id: 1073325
Other names: CICC 10466, DSM 24579, NRRL B-59666, S. echinorum, Salegentibacter echinorum Xia et al. 2014, Salegentibacter sp. HD4, strain HD4
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