STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHO63432.1Protein of unknown function. (329 aa)    
Predicted Functional Partners:
SHO63431.1
Membrane-bound lytic murein transglycosylase D.
       0.737
SHO60932.1
Hypothetical protein.
  
     0.652
SHO62183.1
Hypothetical protein.
  
     0.608
SHO65401.1
Protein of unknown function.
  
     0.602
SHO63429.1
Predicted O-methyltransferase YrrM.
       0.586
SHO62657.1
Hypothetical protein.
  
     0.579
SHO62182.1
Hypothetical protein.
  
     0.570
SHO63428.1
Predicted Zn-dependent peptidase.
       0.567
SHO62068.1
Polysaccharide lyase family 4, domain II.
  
     0.548
SHO64760.1
Hypothetical protein.
  
     0.521
Your Current Organism:
Algoriphagus zhangzhouensis
NCBI taxonomy Id: 1073327
Other names: A. zhangzhouensis, Algoriphagus sp. 12C11, Algoriphagus zhangzhouensis Yang et al. 2013, CGMCC 1.11027, DSM 25035, MCCC 1F01099, strain 12C11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.