STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ71835.1Peroxiredoxin (alkyl hydroperoxide reductase subunit C). (214 aa)    
Predicted Functional Partners:
SDQ71809.1
Thioredoxin.
 
  0.929
SDQ71785.1
Hypothetical protein.
 
     0.863
SDQ78548.1
Peroxiredoxin Q/BCP.
 
 
   0.644
SDQ05017.1
Thioredoxin.
  
  0.608
SDQ08486.1
Thioredoxin.
  
  0.608
SDR04281.1
Thiol-disulfide isomerase or thioredoxin.
  
  0.608
SDR07738.1
Thiol-disulfide isomerase or thioredoxin.
  
  0.608
SDQ64226.1
Thioredoxin reductase (NADPH).
  
 
 0.604
SDQ61358.1
Thioredoxin domain-containing protein.
  
  0.603
SDQ07870.1
Thioredoxin reductase (NADPH).
  
 
 0.600
Your Current Organism:
Muricauda zhangzhouensis
NCBI taxonomy Id: 1073328
Other names: CGMCC 1.11028, DSM 25030, M. zhangzhouensis, MCCC 1F01096, Muricauda sp. 12C25, Muricauda zhangzhouensis Yang et al. 2013, strain 12C25
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