STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMG30886.1Radical SAM domain-containing protein. (45 aa)    
Predicted Functional Partners:
EMG29906.1
COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit.
  
 0.991
frdB
COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
  
 0.970
EMG30072.1
Fumarate reductase respiratory complex, transmembrane subunit.
  
 0.957
EMG29582.1
Iron-sulfur protein; COG1145 Ferredoxin.
  
 0.932
napG
Quinol dehydrogenase periplasmic component; COG1145 Ferredoxin.
  
 
 0.782
EMG31031.1
COG0372 Citrate synthase; Belongs to the citrate synthase family.
  
 0.752
fumC
Class II fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
  
 0.748
EMG31157.1
Ubiquinol-cytochrome c reductase, iron-sulfur subunit; COG0723 Rieske Fe-S protein.
  
 0.732
EMG31381.1
Glyceraldehyde-3-phosphate dehydrogenase 2; COG5016 Pyruvate/oxaloacetate carboxyltransferase.
     
 0.705
EMG29738.1
COG0039 Malate/lactate dehydrogenases; Belongs to the LDH/MDH superfamily.
  
 0.612
Your Current Organism:
Campylobacter showae CC57C
NCBI taxonomy Id: 1073353
Other names: C. showae CC57C, Campylobacter sp. CC57C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.