STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETD26072.1Hypothetical protein. (350 aa)    
Predicted Functional Partners:
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
   
 0.999
ETD21958.1
Hypothetical protein.
 
 0.969
ETD26073.1
Hypothetical protein.
 
 
 0.966
ETD23186.1
Hypothetical protein.
  
 0.965
ETD21973.1
Hypothetical protein.
   
 0.874
recA
Protein recA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
  
 0.814
ETD22968.1
Hypothetical protein.
   
   0.726
ETD22622.1
Hypothetical protein.
   
   0.726
ETD26074.1
Hypothetical protein.
     
 0.715
ETD17130.1
Hypothetical protein.
  
 0.694
Your Current Organism:
Ruminococcus lactaris
NCBI taxonomy Id: 1073376
Other names: R. lactaris CC59_002D, Ruminococcaceae bacterium CC59_002D, Ruminococcus lactaris CC59_002D, Ruminococcus sp. CC59_002D
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.