STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uppPUndecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. (274 aa)    
Predicted Functional Partners:
SMH36564.1
Diacylglycerol kinase (ATP).
    
 0.957
mraY
Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.
    
 0.955
SMH29465.1
Undecaprenyl diphosphate synthase.
     
 0.954
SMH26351.1
Undecaprenyl-diphosphatase; Non-canonical start codon; manually curated.
  
 
 0.674
SMH26909.1
UDP-GlcNAc:undecaprenyl-phosphate GlcNAc-1-phosphate transferase.
    
 0.554
SMH33041.1
Putative ABC transport system permease protein.
  
  
 0.514
SMH37955.1
Serine/threonine protein kinase.
  
  
 0.482
rsmA
16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
  
  
 0.470
gshAB
Glutamate-cysteine ligase /glutathione synthase; Synthesizes glutathione from L-glutamate and L-cysteine via gamma-L-glutamyl-L-cysteine; In the N-terminal section; belongs to the glutamate--cysteine ligase type 1 family. Type 2 subfamily.
   
  
 0.458
SMH32590.1
PTS system IIA component, Glc family.
  
    0.456
Your Current Organism:
Carnobacterium iners
NCBI taxonomy Id: 1073423
Other names: C. iners, CCUG 62000, Carnobacterium iners Snauwaert et al. 2013, Carnobacterium sp. LMG 26642, DSM 28070, LMG 26642, LMG:26642
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