STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAB09140.1Putative glycosyltransferase. (416 aa)    
Predicted Functional Partners:
aspT
Aspartate aminotransferase AspT.
       0.628
dnaX
DNA polymerase III gamma/tau subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
 
    0.624
GAB10641.1
Hypothetical protein.
  
 
   0.608
GAB11904.1
Hypothetical protein.
  
 
   0.582
GAB09829.1
Arabinosyltransferase.
  
 
   0.574
GAB09828.1
Arabinosyltransferase.
  
 
   0.573
GAB09827.1
Arabinosyltransferase.
  
 
   0.562
GAB09103.1
Hypothetical protein.
  
 
   0.557
pimE
Mannosyltransferase PimE.
  
  
 
0.530
GAB08938.1
Mycolyltransferase.
  
     0.524
Your Current Organism:
Gordonia araii
NCBI taxonomy Id: 1073574
Other names: G. araii NBRC 100433, Gordonia araii NBRC 100433, Gordonia araii str. NBRC 100433, Gordonia araii strain NBRC 100433
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.