STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALB27945.12-dehydro-3-deoxyphosphooctonate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (244 aa)    
Predicted Functional Partners:
ALB27944.1
L-seryl-tRNA selenium transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.973
ALB27943.1
Dihydroorotase; Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.960
ALB27946.1
2-keto-3-deoxygluconate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.860
ALB27940.1
PTS cellbiose transporter subunit IIC; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
    0.818
ALB27942.1
PTS-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.793
ALB27941.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.782
ALB30096.1
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.529
ALB29810.1
Hydrolase; Phosphotriesterase homology protein; PhP; YhfV; member of a family of proteins related to phosphotriesterase (PTE); Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.409
Your Current Organism:
Lactobacillus heilongjiangensis
NCBI taxonomy Id: 1074467
Other names: DSM 28069, L. heilongjiangensis, LMG 26166, LMG:26166, Lactobacillus heilongjiangensis Gu et al. 2013, Lactobacillus sp. S4-3, NCIMB 14701, strain S4-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.