STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALB28670.1Rod shape-determining protein MreB; Derived by automated computational analysis using gene prediction method: Protein Homology. (329 aa)    
Predicted Functional Partners:
ALB28674.1
Cell division protein FtsW; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family.
 
 
 0.965
ALB28691.1
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
 
 
 0.950
ALB28672.1
Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.
  
    0.920
ALB29325.1
XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.853
murA-2
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
 
  
 0.799
ALB28671.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.792
ALB28675.1
Glycine cleavage system protein H; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.783
ALB28673.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.741
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
 
 0.740
ALB28668.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.655
Your Current Organism:
Lactobacillus heilongjiangensis
NCBI taxonomy Id: 1074467
Other names: DSM 28069, L. heilongjiangensis, LMG 26166, LMG:26166, Lactobacillus heilongjiangensis Gu et al. 2013, Lactobacillus sp. S4-3, NCIMB 14701, strain S4-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.