STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000225825_01495Unannotated protein. (494 aa)    
Predicted Functional Partners:
GCA_000225825_00783
Unannotated protein.
  
 0.999
GCA_000225825_00464
Unannotated protein.
 
 0.966
GCA_000225825_01873
Unannotated protein.
 
 0.964
GCA_000225825_01872
Unannotated protein.
  
  0.949
GCA_000225825_00259
Unannotated protein.
    
 0.917
GCA_000225825_01874
Unannotated protein.
 
 
 0.900
GCA_000225825_01122
Unannotated protein.
  
 
 0.859
GCA_000225825_02612
Unannotated protein.
  
 0.846
GCA_000225825_02706
Unannotated protein.
  
 0.829
GCA_000225825_01219
Unannotated protein.
  
 0.787
Your Current Organism:
Brachybacterium squillarum
NCBI taxonomy Id: 1074488
Other names: B. squillarum M-6-3, Brachybacterium sp. M-6-3, Brachybacterium squillarum JCM 16464, Brachybacterium squillarum KACC 14221, Brachybacterium squillarum M-6-3, Brachybacterium squillarum str. M-6-3, Brachybacterium squillarum strain M-6-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.