STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000225825_01931Unannotated protein. (273 aa)    
Predicted Functional Partners:
GCA_000225825_01932
Unannotated protein.
  
    0.839
GCA_000225825_01933
Unannotated protein.
       0.829
GCA_000225825_02706
Unannotated protein.
   
 0.794
GCA_000225825_01934
Unannotated protein.
       0.677
GCA_000225825_01584
Unannotated protein.
   
  0.650
GCA_000225825_00846
Unannotated protein.
   
 
  0.581
GCA_000225825_02708
Unannotated protein.
   
 
 0.524
GCA_000225825_01935
Unannotated protein.
       0.464
GCA_000225825_01868
Unannotated protein.
  
     0.435
GCA_000225825_00185
Unannotated protein.
    
   0.429
Your Current Organism:
Brachybacterium squillarum
NCBI taxonomy Id: 1074488
Other names: B. squillarum M-6-3, Brachybacterium sp. M-6-3, Brachybacterium squillarum JCM 16464, Brachybacterium squillarum KACC 14221, Brachybacterium squillarum M-6-3, Brachybacterium squillarum str. M-6-3, Brachybacterium squillarum strain M-6-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.