STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ75601.1Protein of unknown function. (148 aa)    
Predicted Functional Partners:
SDJ75635.1
Protein TonB.
  
    0.702
SDK20784.1
BNR repeat-like domain-containing protein.
  
     0.555
katG
Catalase-peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.
  
    0.515
SDK01663.1
Imidazolonepropionase.
  
     0.480
SDJ75665.1
Cytochrome oxidase maturation protein, cbb3-type.
       0.464
SDJ75694.1
Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family.
       0.464
SDJ75566.1
TonB family C-terminal domain-containing protein.
  
    0.453
SDL08895.1
ADP-ribose pyrophosphatase YjhB, NUDIX family.
  
    0.439
Your Current Organism:
Catalinimonas alkaloidigena
NCBI taxonomy Id: 1075417
Other names: Bacteroidetes bacterium CNU-914, C. alkaloidigena, Catalinimonas alkaloidigena Choi et al. 2013, DSM 25186, KCCM 90101, strain CNU-914
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.