STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK82473.1Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. (147 aa)    
Predicted Functional Partners:
SDK82550.1
Heme exporter protein C.
 
 
 0.997
SDK82427.1
Cytochrome c-type biogenesis protein CcmF.
 
 
 0.966
SDK82586.1
Heme exporter protein B.
 
 
 0.957
SDK82517.1
Hypothetical protein.
 
     0.802
SDL68226.1
WD40-like Beta Propeller Repeat.
  
    0.745
SDL76085.1
Hypothetical protein.
  
     0.744
SDL81971.1
ABC transporter.
 
     0.707
SDJ86820.1
Hypothetical protein.
  
     0.706
SDL65482.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.706
SDK76539.1
Hypothetical protein.
  
     0.699
Your Current Organism:
Catalinimonas alkaloidigena
NCBI taxonomy Id: 1075417
Other names: Bacteroidetes bacterium CNU-914, C. alkaloidigena, Catalinimonas alkaloidigena Choi et al. 2013, DSM 25186, KCCM 90101, strain CNU-914
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.