STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK84233.1Glycosyl hydrolase family 57. (816 aa)    
Predicted Functional Partners:
SDK84200.1
(1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase.
  
  0.965
SDK84146.1
4-alpha-glucanotransferase.
 
  
  0.891
SDL90862.1
Maltose alpha-D-glucosyltransferase/ alpha-amylase.
 
  
 0.838
SDK36987.1
Starch phosphorylase.
 
 
 0.831
SDK84270.1
Maltooligosyltrehalose trehalohydrolase.
 
  
  0.824
SDK78660.1
Starch synthase.
  
 
  0.650
SDK15309.1
Nucleotidyl transferase.
    
 0.623
SDL26192.1
Glycogen operon protein; Belongs to the glycosyl hydrolase 13 family.
    
  0.620
SDK69274.1
Phosphomannomutase.
    
  0.519
SDL53549.1
Phosphoglucomutase.
    
  0.519
Your Current Organism:
Catalinimonas alkaloidigena
NCBI taxonomy Id: 1075417
Other names: Bacteroidetes bacterium CNU-914, C. alkaloidigena, Catalinimonas alkaloidigena Choi et al. 2013, DSM 25186, KCCM 90101, strain CNU-914
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.