Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDJ95845.1 | SDK97443.1 | SAMN05421823_101522 | SAMN05421823_10436 | 5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Cupin domain-containing protein. | 0.629 |
| SDJ95845.1 | SDK97473.1 | SAMN05421823_101522 | SAMN05421823_10437 | 5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 0.579 |
| SDJ95845.1 | metG | SAMN05421823_101522 | SAMN05421823_108108 | 5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.778 |
| SDK37772.1 | SDK97443.1 | SAMN05421823_102591 | SAMN05421823_10436 | Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase. | Cupin domain-containing protein. | 0.794 |
| SDK37772.1 | SDL07464.1 | SAMN05421823_102591 | SAMN05421823_104306 | Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase. | Hypothetical protein. | 0.992 |
| SDK37772.1 | SDL27929.1 | SAMN05421823_102591 | SAMN05421823_10589 | Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase. | Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase. | 0.792 |
| SDK37772.1 | SDL32179.1 | SAMN05421823_102591 | SAMN05421823_105195 | Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase. | Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase. | 0.741 |
| SDK97378.1 | SDK97413.1 | SAMN05421823_10434 | SAMN05421823_10435 | AraC-type DNA-binding protein. | Uncharacterized damage-inducible protein DinB (forms a four-helix bundle). | 0.529 |
| SDK97378.1 | SDK97443.1 | SAMN05421823_10434 | SAMN05421823_10436 | AraC-type DNA-binding protein. | Cupin domain-containing protein. | 0.541 |
| SDK97378.1 | SDK97473.1 | SAMN05421823_10434 | SAMN05421823_10437 | AraC-type DNA-binding protein. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 0.513 |
| SDK97413.1 | SDK97378.1 | SAMN05421823_10435 | SAMN05421823_10434 | Uncharacterized damage-inducible protein DinB (forms a four-helix bundle). | AraC-type DNA-binding protein. | 0.529 |
| SDK97413.1 | SDK97443.1 | SAMN05421823_10435 | SAMN05421823_10436 | Uncharacterized damage-inducible protein DinB (forms a four-helix bundle). | Cupin domain-containing protein. | 0.746 |
| SDK97413.1 | SDK97473.1 | SAMN05421823_10435 | SAMN05421823_10437 | Uncharacterized damage-inducible protein DinB (forms a four-helix bundle). | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 0.746 |
| SDK97443.1 | SDJ95845.1 | SAMN05421823_10436 | SAMN05421823_101522 | Cupin domain-containing protein. | 5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.629 |
| SDK97443.1 | SDK37772.1 | SAMN05421823_10436 | SAMN05421823_102591 | Cupin domain-containing protein. | Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase. | 0.794 |
| SDK97443.1 | SDK97378.1 | SAMN05421823_10436 | SAMN05421823_10434 | Cupin domain-containing protein. | AraC-type DNA-binding protein. | 0.541 |
| SDK97443.1 | SDK97413.1 | SAMN05421823_10436 | SAMN05421823_10435 | Cupin domain-containing protein. | Uncharacterized damage-inducible protein DinB (forms a four-helix bundle). | 0.746 |
| SDK97443.1 | SDK97473.1 | SAMN05421823_10436 | SAMN05421823_10437 | Cupin domain-containing protein. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 0.774 |
| SDK97443.1 | SDL07464.1 | SAMN05421823_10436 | SAMN05421823_104306 | Cupin domain-containing protein. | Hypothetical protein. | 0.888 |
| SDK97443.1 | SDL27929.1 | SAMN05421823_10436 | SAMN05421823_10589 | Cupin domain-containing protein. | Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase. | 0.794 |
page 1 of 3