STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL36230.1Por secretion system C-terminal sorting domain-containing protein. (837 aa)    
Predicted Functional Partners:
SDL36269.1
Hypothetical protein.
       0.465
SDK23263.1
Beta-glucosidase.
 
 
  0.454
SDJ89811.1
Por secretion system C-terminal sorting domain-containing protein; Belongs to the glycosyl hydrolase 26 family.
   
 0.442
SDK31928.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
 
  0.420
SDM17329.1
Hexosaminidase.
  
  
  0.404
Your Current Organism:
Catalinimonas alkaloidigena
NCBI taxonomy Id: 1075417
Other names: Bacteroidetes bacterium CNU-914, C. alkaloidigena, Catalinimonas alkaloidigena Choi et al. 2013, DSM 25186, KCCM 90101, strain CNU-914
Server load: low (28%) [HD]