STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL83620.1Putative bacilliredoxin, YphP/YqiW family; Belongs to the UPF0403 family. (139 aa)    
Predicted Functional Partners:
bshC
Bacillithiol biosynthesis cysteine-adding enzyme BshC; Belongs to the BshC family.
  
   
 0.789
SDL74836.1
Bacillithiol system protein YtxJ.
  
   
 0.772
SDK68408.1
N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA.
  
     0.771
SDL46214.1
Bacillithiol biosynthesis deacetylase BshB1.
  
     0.732
SDL74508.1
Thioredoxin reductase (NADPH).
  
     0.715
SDL96550.1
DinB superfamily protein.
  
     0.693
SDL83578.1
FeS assembly SUF system protein.
  
    0.679
SDL83527.1
Cysteine desulfuration protein SufE.
       0.656
SDK61856.1
Protein of unknown function.
  
     0.653
SDL83489.1
Cysteine desulfurase / selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
       0.643
Your Current Organism:
Catalinimonas alkaloidigena
NCBI taxonomy Id: 1075417
Other names: Bacteroidetes bacterium CNU-914, C. alkaloidigena, Catalinimonas alkaloidigena Choi et al. 2013, DSM 25186, KCCM 90101, strain CNU-914
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