STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000344615_04419Unannotated protein. (472 aa)    
Predicted Functional Partners:
GCA_000344615_02085
Unannotated protein.
  
  
 
0.688
GCA_000344615_03373
Unannotated protein.
     
 0.589
GCA_000344615_01179
Unannotated protein.
     
 0.585
GCA_000344615_02314
Unannotated protein.
    
  0.585
GCA_000344615_05021
Unannotated protein.
     
 0.580
GCA_000344615_04956
Unannotated protein.
  
 
  0.560
GCA_000344615_04420
Unannotated protein.
       0.527
GCA_000344615_00201
Unannotated protein.
  
  
 0.525
GCA_000344615_01992
Unannotated protein.
     
 0.525
GCA_000344615_02311
Unannotated protein.
     
 0.525
Your Current Organism:
Janthinobacterium sp. CG3
NCBI taxonomy Id: 1075768
Other names: J. sp. CG3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.