STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000344615_04830Unannotated protein. (293 aa)    
Predicted Functional Partners:
GCA_000344615_00734
Unannotated protein.
     
 0.817
GCA_000344615_01288
Unannotated protein.
  
  
  0.593
GCA_000344615_04829
Unannotated protein.
       0.543
GCA_000344615_02847
Unannotated protein.
   
    0.522
GCA_000344615_02851
Unannotated protein.
 
     0.502
GCA_000344615_00299
Unannotated protein.
    
  0.493
GCA_000344615_00672
Unannotated protein.
   
  0.487
GCA_000344615_03468
Unannotated protein.
   
 
  0.486
GCA_000344615_00694
Unannotated protein.
    
 0.483
GCA_000344615_00701
Unannotated protein.
    
 0.483
Your Current Organism:
Janthinobacterium sp. CG3
NCBI taxonomy Id: 1075768
Other names: J. sp. CG3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.