STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000527115_01407Unannotated protein. (273 aa)    
Predicted Functional Partners:
GCA_000527115_01408
Unannotated protein.
 
     0.894
GCA_000527115_03216
Unannotated protein.
     
 0.686
GCA_000527115_00936
Unannotated protein.
   
  0.662
GCA_000527115_02234
Unannotated protein.
  
     0.647
GCA_000527115_02144
Unannotated protein.
 
     0.572
GCA_000527115_03984
Unannotated protein.
  
  0.567
GCA_000527115_04278
Unannotated protein.
  
  0.564
GCA_000527115_01409
Unannotated protein.
       0.518
GCA_000527115_03868
Unannotated protein.
  
  0.518
GCA_000527115_03561
Unannotated protein.
  
     0.502
Your Current Organism:
Methylosinus sp. LW3
NCBI taxonomy Id: 107635
Other names: M. sp. LW3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.