STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000527115_01941Unannotated protein. (124 aa)    
Predicted Functional Partners:
GCA_000527115_03046
Unannotated protein.
 
  
  0.728
GCA_000527115_01939
Unannotated protein.
 
     0.717
GCA_000527115_01119
Unannotated protein.
  
     0.711
GCA_000527115_01963
Unannotated protein.
  
     0.693
GCA_000527115_00234
Unannotated protein.
  
     0.690
GCA_000527115_03587
Unannotated protein.
  
     0.687
GCA_000527115_00232
Unannotated protein.
  
  
  0.680
GCA_000527115_00077
Unannotated protein.
  
     0.658
GCA_000527115_03419
Unannotated protein.
  
     0.646
GCA_000527115_00177
Unannotated protein.
  
     0.644
Your Current Organism:
Methylosinus sp. LW3
NCBI taxonomy Id: 107635
Other names: M. sp. LW3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.