STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000527115_03791Unannotated protein. (465 aa)    
Predicted Functional Partners:
GCA_000527115_01130
Unannotated protein.
 
 
 
 0.940
GCA_000527115_00882
Unannotated protein.
    
  0.791
GCA_000527115_00804
Unannotated protein.
    
 0.726
GCA_000527115_03792
Unannotated protein.
 
   0.697
GCA_000527115_03611
Unannotated protein.
 
  
 0.657
GCA_000527115_02967
Unannotated protein.
    
 0.645
GCA_000527115_00839
Unannotated protein.
    
 0.635
GCA_000527115_03649
Unannotated protein.
  
  
  0.574
GCA_000527115_04562
Unannotated protein.
    
 0.551
GCA_000527115_02965
Unannotated protein.
  
  
  0.509
Your Current Organism:
Methylosinus sp. LW3
NCBI taxonomy Id: 107635
Other names: M. sp. LW3
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.